Bioconductor - metaboliteIDmapping
Bioconductor 3.22
Annotation Packages
metaboliteIDmapping
metaboliteIDmapping
This is the
released
version of metaboliteIDmapping; for the devel version, see
metaboliteIDmapping
Mapping of Metabolite IDs from Different Sources
DOI:
10.18129/B9.bioc.metaboliteIDmapping
Bioconductor version:
Release (3.22)
The package provides a comprehensive mapping table of nine different Metabolite ID formats and their common name. The data has been collected and merged from four publicly available source, including HMDB, Comptox Dashboard, ChEBI, and the graphite Bioconductor R package.
Author:
Sebastian Canzler [aut, cre]
ORCID: 0000-0001-7935-9582
Maintainer:
Sebastian Canzler
Citation (from within R, enter
citation("metaboliteIDmapping")
):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("metaboliteIDmapping")
For older versions of R, please refer to the appropriate
Bioconductor release
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("metaboliteIDmapping")
metaboliteIDmapping
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Reference Manual
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Details
biocViews
AnnotationData
AnnotationHub
CustomDBSchema
FunctionalAnnotation
Version
1.0.0
License
GPL-3
Depends
R (>= 4.0.0)
Imports
AnnotationHub
System Requirements
URL
See More
Suggests
magrittr
graphite
dplyr
tidyr
tibble
rappdirs
XML
readxl
stringr
, utils,
knitr
sets
R.utils
readr
conflicted
rmarkdown
Linking To
Enhances
Depends On Me
Imports Me
multiGSEA
Suggests Me
Links To Me
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Installation
instructions to use this package in your R session.
Source Package
metaboliteIDmapping_1.0.0.tar.gz
Windows Binary (x86_64)
macOS Binary (x86_64)
macOS Binary (arm64)
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