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Prospective validation and real-time implementation of an automated machine learning postoperative mortality prediction model. Br J Anaesth. 2026 Jan 17. Wingert T, Williams T, Syed B, Hill B, Grogan T, Young A, Antongiorgi Z, Salari V, Joosten A, Hofer I, Halperin E, Cannesson M, Gabel E. PMID: 41549026; PMCID: PMC12927408.
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Author Correction: Homophily and acrophily as drivers of political segregation. Nat Hum Behav. 2025 Dec; 9(12):2669. Goldenberg A, Abruzzo JM, Huang Z, Schöne J, Bailey D, Willer R, Halperin E, Gross JJ. PMID: 40935912.
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Perceived threat from minorities decreases with increased societal threat after the 2021 military coup in Myanmar. Sci Rep. 2025 Nov 23; 15(1):44545. Vandermeulen D, Endevelt K, Goldenberg A, Halperin E. PMID: 41276559; PMCID: PMC12738759.
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Balanced Area Deprivation Index (bADI): Enhancing Social Determinants of Health Indices to Strengthen Their Association With Healthcare Clinical Outcomes, Utilization, and Costs. J Public Health Manag Pract. 2025 Nov-Dec 01; 31(6):998-1007. Morid MA, Tillman RE, Halperin E. PMID: 40779673.
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Unico: a unified model for cell-type resolution genomics from heterogeneous omics data. Genome Biol. 2025 Oct 03; 26(1):333. Chen ZJ, Rahmani E, Halperin E. PMID: 41044605; PMCID: PMC12492706.
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Integrated ambient modeling and genetic demultiplexing of single-cell RNA+ATAC multiome experiments with Ambimux. bioRxiv. 2025 Aug 26. Alvarez M, Li T, Lee SHT, Arasu UT, Selvarajan I, Örd T, Rahmani E, Chen ZJ, Avram O, Kar A, Kaminska D, Männistö V, Halperin E, Pihlajamäki J, Luo C, Kaikkonen MU, Zaitlen N, Pajukanta P. PMID: 40909685; PMCID: PMC12407767.
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Single-cell DNA methylome and 3D genome atlas of human subcutaneous adipose tissue. Nat Genet. 2025 Sep; 57(9):2238-2249. Chen ZJ, Das SS, Kar A, Lee SHT, Abuhanna KD, Alvarez M, Sukhatme MG, Wang Z, Gelev KZ, Heffel MG, Zhang Y, Avram O, Rahmani E, Sankararaman S, Laakso M, Heinonen S, Peltoniemi H, Halperin E, Pietiläinen KH, Luo C, Pajukanta P. PMID: 40835891; PMCID: PMC12373012.
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Increasing Perceived Outgroup Heterogeneity Following Exposure to Extreme Violence: An Intervention Tournament in Times of War. Pers Soc Psychol Bull. 2025 Jul 22; 1461672251345517. Ushomirsky I, Hasson Y, Atia R, Attias N, Balmas M, Endevelt K, Gur T, Hameiri B, Hebel-Sela S, Adomi Leshem O, Malovicki-Yaffe N, Manekin D, Perry A, Porat R, Saguy T, Shuman E, Halperin E. PMID: 40693721.
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Politically-targeted intergroup interventions promote social equality and engagement. Commun Psychol. 2025 Apr 23; 3(1):69. Nir N, Halperin E. PMID: 40269246; PMCID: PMC12018261.
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Intergroup psychological interventions highlighting commonalities can increase the perceived legitimacy of critical voices. Commun Psychol. 2025 Apr 16; 3(1):63. Aldar L, Pliskin R, Hasson Y, Halperin E. PMID: 40240568; PMCID: PMC12003157.
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Advantaged identity management strategies differentiate five subgroups of white Americans. Commun Psychol. 2025 Apr 11; 3(1):58. Shuman E, Halperin E, Knowles E. PMID: 40217091; PMCID: PMC11992219.
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Examining the impact of learning about a resolved conflict on attitudes in an ongoing conflict: Evidence from the Israeli-Palestinian context. Group Process Intergroup Relat. 2025 Sep; 28(6):1263-1289. Shulman D, Reifen-Tagar M, Omri N, Halperin E. PMID: 40785778; PMCID: PMC12334085.
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Virtual contact improves intergroup relations between non-Muslim American and Muslim students from the Middle East, North Africa and Southeast Asia in a field quasi-experiment. Commun Psychol. 2025 Mar 03; 3(1):34. Hebel-Sela S, Hameiri B, Tropp LR, Moore-Berg SL, Saxe R, Halperin E, Bruneau E. PMID: 40033129; PMCID: PMC11876591.
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Emotion regulation contagion drives reduction in negative intergroup emotions. Nat Commun. 2025 Feb 06; 16(1):1387. Pinus M, Cao Y, Halperin E, Coman A, Gross JJ, Goldenberg A. PMID: 39910059; PMCID: PMC11799416.
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Attitude moralization in the context of collective action: How participation in collective action may foster moralization over time. J Pers Soc Psychol. 2025 Dec; 129(6):1130-1150. Leal A, van Zomeren M, González R, Gordijn E, Carozzi P, Reifen-Tagar M, Álvarez B, Frigolett C, Halperin E. PMID: 39679988.
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Single-cell DNA methylome and 3D genome atlas of the human subcutaneous adipose tissue. bioRxiv. 2024 Nov 03. Chen ZJ, Das SS, Kar A, Lee SHT, Abuhanna KD, Alvarez M, Sukhatme MG, Gelev KZ, Heffel MG, Zhang Y, Avram O, Rahmani E, Sankararaman S, Heinonen S, Peltoniemi H, Halperin E, Pietiläinen KH, Luo C, Pajukanta P. PMID: 39554055; PMCID: PMC11566006.
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Attraction to politically extreme users on social media. PNAS Nexus. 2024 Oct; 3(10):pgae395. Zimmerman F, Bailey DD, Muric G, Ferrara E, Schöne J, Willer R, Halperin E, Navajas J, Gross JJ, Goldenberg A. PMID: 39411093; PMCID: PMC11475624.
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Accurate prediction of disease-risk factors from volumetric medical scans by a deep vision model pre-trained with 2D scans. Nat Biomed Eng. 2025 Apr; 9(4):507-520. Avram O, Durmus B, Rakocz N, Corradetti G, An U, Nittala MG, Terway P, Rudas A, Chen ZJ, Wakatsuki Y, Hirabayashi K, Velaga S, Tiosano L, Corvi F, Verma A, Karamat A, Lindenberg S, Oncel D, Almidani L, Hull V, Fasih-Ahmad S, Esmaeilkhanian H, Cannesson M, Wykoff CC, Rahmani E, Arnold CW, Zhou B, Zaitlen N, Gronau I, Sankararaman S, Chiang JN, Sadda SR, Halperin E. PMID: 39354052; PMCID: PMC12695137.
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The paradoxical brain: paradoxes impact conflict perspectives through increased neural alignment. Cereb Cortex. 2024 09 03; 34(9). Levy J, Kluge A, Hameiri B, Lankinen K, Bar-Tal D, Halperin E. PMID: 39344195; PMCID: PMC11439920.
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The affective gap: a call for a comprehensive examination of the discrete emotions underlying affective polarization. Cogn Emot. 2024 Jun; 38(4):442-450. Halperin E, Kretchner M, Hirsch-Hoefler S, Elad-Strenger J. PMID: 38874559.
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Genome wide association study and genomic risk prediction of age related macular degeneration in Israel. Sci Rep. 2024 06 06; 14(1):13034. Grunin M, Triffon D, Beykin G, Rahmani E, Schweiger R, Tiosano L, Khateb S, Hagbi-Levi S, Rinsky B, Munitz R, Winkler TW, Heid IM, Halperin E, Carmi S, Chowers I. PMID: 38844476; PMCID: PMC11156861.
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Zoom out: An intervention on the virtual learning environment improves minority students' grades in two field experiments in Israel. Proc Natl Acad Sci U S A. 2024 May 28; 121(22):e2313496121. Endevelt K, Halperin E, Porat R. PMID: 38771874; PMCID: PMC11145196.
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Personalized mood prediction from patterns of behavior collected with smartphones. NPJ Digit Med. 2024 Feb 28; 7(1):49. Balliu B, Douglas C, Seok D, Shenhav L, Wu Y, Chatzopoulou D, Kaiser W, Chen V, Kim J, Deverasetty S, Arnaudova I, Gibbons R, Congdon E, Craske MG, Freimer N, Halperin E, Sankararaman S, Flint J. PMID: 38418551; PMCID: PMC10902386.
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Between victory and peace: Unravelling the paradox of hope in intractable conflicts. Br J Soc Psychol. 2024 Jul; 63(3):1357-1384. Shani M, Kunst JR, Anjum G, Obaidi M, Leshem OA, Antonovsky R, van Zalk M, Halperin E. PMID: 38375955.
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Defend, Deny, Distance, and Dismantle: A New Measure of Advantaged Identity Management. Pers Soc Psychol Bull. 2025 Aug; 51(8):1490-1518. Shuman E, van Zomeren M, Saguy T, Knowles E, Halperin E. PMID: 38284619.
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Disadvantaged group members are prouder of their group when using the language of the dominant group compared to their native language. Proc Natl Acad Sci U S A. 2024 Jan 02; 121(1):e2307736120. Hasan-Aslih S, Idan O, Willer R, Halperin E. PMID: 38147544; PMCID: PMC10769828.
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SLIViT: a general AI framework for clinical-feature diagnosis from limited 3D biomedical-imaging data. Res Sq. 2023 Nov 21. Avram O, Durmus B, Rakocz N, Corradetti G, An U, Nitalla MG, Rudas A, Wakatsuki Y, Hirabayashi K, Velaga S, Tiosano L, Corvi F, Verma A, Karamat A, Lindenberg S, Oncel D, Almidani L, Hull V, Fasih-Ahmad S, Esmaeilkhanian H, Wykoff CC, Rahmani E, Arnold CW, Zhou B, Zaitlen N, Gronau I, Sankararaman S, Chiang JN, Sadda SR, Halperin E. PMID: 38045283; PMCID: PMC10690310.
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How our ideological out-group shapes our emotional response to our shared socio-political reality. Br J Soc Psychol. 2024 Apr; 63(2):723-744. Elad-Strenger J, Goldenberg A, Saguy T, Halperin E. PMID: 37987547.
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Should I Stay or Should I Go? Motives and Barriers for Sustained Collective Action Toward Social Change. Pers Soc Psychol Bull. 2025 Jun; 51(6):910-927. Cohen-Eick N, Shuman E, van Zomeren M, Halperin E. PMID: 37921088; PMCID: PMC12044214.
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When Are Social Protests Effective? Trends Cogn Sci. 2024 03; 28(3):252-263. Shuman E, Goldenberg A, Saguy T, Halperin E, van Zomeren M. PMID: 37914605.
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Getting closer: compassion training increases feelings of closeness toward a disliked person. Sci Rep. 2023 10 26; 13(1):18339. Cernadas Curotto P, Halperin E, Sander D, Klimecki O. PMID: 37884610; PMCID: PMC10603062.
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Prediction of activity in eyes with macular neovascularization due to age-related macular degeneration using deep learning. Eye (Lond). 2024 Apr; 38(5):819-821. Corradetti G, Rakocz N, Chiang JN, Avram O, Alagorie AR, Nittala MG, Karamat A, Boyer DS, Sarraf D, Halperin E, Sadda S. PMID: 37884703; PMCID: PMC10966030.
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Genome-wide association study and genomic risk prediction of age-related macular degeneration in Israel. medRxiv. 2023 Sep 06. Grunin M, Triffon D, Beykin G, Rahmani E, Schweiger R, Tiosano L, Khateb S, Hagbi-Levi S, Rinsky B, Munitz R, Winkler TW, Heid IM, Halperin E, Carmi S, Chowers I. PMID: 37732190; PMCID: PMC10508791.
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The aversive bystander effect whereby egalitarian bystanders overestimate the confrontation of prejudice. Sci Rep. 2023 06 29; 13(1):10538. Szekeres H, Halperin E, Kende A, Saguy T. PMID: 37386078; PMCID: PMC10310732.
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The mother of violations: Motherhood as the primary expectation of women. Br J Soc Psychol. 2023 Oct; 62(4):1875-1896. Szekeres H, Halperin E, Saguy T. PMID: 37329215.
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Communicating with ethnic minorities during COVID-19: An experimental test of the effect of self-, ingroup-, and intergroup-focused messages. Heliyon. 2023 Jun; 9(6):e16629. Frisch-Aviram N, Hasan-Aslih S, Halperin E. PMID: 37287611; PMCID: PMC10226279.
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SNV-FEAST: microbial source tracking with single nucleotide variants. Genome Biol. 2023 04 30; 24(1):101. Briscoe L, Halperin E, Garud NR. PMID: 37121994; PMCID: PMC10150486.
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Educating for inclusion: Diversity education programs can reduce prejudice toward outgroups in Israel. Proc Natl Acad Sci U S A. 2023 04 18; 120(16):e2218621120. Weiss CM, Ran S, Halperin E. PMID: 37040414; PMCID: PMC10119994.
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Young generations' hopelessness perpetuates long-term conflicts. Sci Rep. 2023 03 25; 13(1):4926. Hasler BS, Leshem OA, Hasson Y, Landau DH, Krayem Y, Blatansky C, Baratz G, Friedman D, Psaltis C, Cakal H, Cohen-Chen S, Halperin E. PMID: 36966154; PMCID: PMC10039691.
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Automated large-scale prediction of exudative AMD progression using machine-read OCT biomarkers. PLOS Digit Health. 2023 Feb; 2(2):e0000106. Rudas A, Chiang JN, Corradetti G, Rakocz N, Avram O, Halperin E, Sadda SR. PMID: 36812608; PMCID: PMC9931262.
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Using performance art to promote intergroup prosociality by cultivating the belief that empathy is unlimited. Nat Commun. 2022 12 16; 13(1):7786. Hasson Y, Amir E, Sobol-Sarag D, Tamir M, Halperin E. PMID: 36526623; PMCID: PMC9756713.
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Homophily and acrophily as drivers of political segregation. Nat Hum Behav. 2023 Feb; 7(2):219-230. Goldenberg A, Abruzzo JM, Huang Z, Schöne J, Bailey D, Willer R, Halperin E, Gross JJ. PMID: 36411346.
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Author Correction: Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative. Genome Med. 2022 Nov 16; 14(1):128. Johnson R, Ding Y, Venkateswaran V, Bhattacharya A, Boulier K, Chiu A, Knyazev S, Schwarz T, Freund M, Zhan L, Burch KS, Caggiano C, Hill B, Rakocz N, Balliu B, Denny CT, Sul JH, Zaitlen N, Arboleda VA, Halperin E, Sankararaman S, Butte MJ, UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working G, Lajonchere C, Geschwind DH, Pasaniuc B. PMID: 36384576; PMCID: PMC9670414.
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The Dual Effect of COVID-19 on Intergroup Conflict in the Korean Peninsula. J Conflict Resolut. 2022 Nov; 66(10):1908-1930. Nir N, Halperin E, Park J. PMID: 38603278; PMCID: PMC9198559.
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Multi-context genetic modeling of transcriptional regulation resolves novel disease loci. Nat Commun. 2022 09 28; 13(1):5704. Thompson M, Gordon MG, Lu A, Tandon A, Halperin E, Gusev A, Ye CJ, Balliu B, Zaitlen N. PMID: 36171194; PMCID: PMC9519579.
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Leveraging genomic diversity for discovery in an electronic health record linked biobank: the UCLA ATLAS Community Health Initiative. Genome Med. 2022 Sep 09; 14(1):104. Johnson R, Ding Y, Venkateswaran V, Bhattacharya A, Boulier K, Chiu A, Knyazev S, Schwarz T, Freund M, Zhan L, Burch KS, Caggiano C, Hill B, Rakocz N, Balliu B, Denny CT, Sul JH, Zaitlen N, Arboleda VA, Halperin E, Sankararaman S, Butte MJ, UCLA Precision Health Data Discovery Repository Working Group, UCLA Precision Health ATLAS Working G, Lajonchere C, Geschwind DH, Pasaniuc B. PMID: 36085083; PMCID: PMC9461263.
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STENSL: Microbial Source Tracking with ENvironment SeLection. mSystems. 2022 10 26; 7(5):e0099521. An U, Shenhav L, Olson CA, Hsiao EY, Halperin E, Sankararaman S. PMID: 36047699; PMCID: PMC9599664.
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Automated Identification of Incomplete and Complete Retinal Epithelial Pigment and Outer Retinal Atrophy Using Machine Learning. Ophthalmol Retina. 2023 02; 7(2):118-126. Chiang JN, Corradetti G, Nittala MG, Corvi F, Rakocz N, Rudas A, Durmus B, An U, Sankararaman S, Chiu A, Halperin E, Sadda SR. PMID: 35995411.
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I hate you when I am anxious: Anxiety during the COVID-19 epidemic and ideological hostility. J Appl Soc Psychol. 2022 Aug 12. Balmas M, Harel TO, Halperin E. PMID: 36249317; PMCID: PMC9538641.
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Predicting attitudinal and behavioral responses to COVID-19 pandemic using machine learning. PNAS Nexus. 2022 Jul; 1(3):pgac093. Pavlovic T, Azevedo F, De K, Riaño-Moreno JC, Maglic M, Gkinopoulos T, Donnelly-Kehoe PA, Payán-Gómez C, Huang G, Kantorowicz J, Birtel MD, Schönegger P, Capraro V, Santamaría-García H, Yucel M, Ibanez A, Rathje S, Wetter E, Stanojevic D, van Prooijen JW, Hesse E, Elbaek CT, Franc R, Pavlovic Z, Mitkidis P, Cichocka A, Gelfand M, Alfano M, Ross RM, Sjåstad H, Nezlek JB, Cislak A, Lockwood P, Abts K, Agadullina E, Amodio DM, Apps MAJ, Aruta JJB, Besharati S, Bor A, Choma B, Cunningham W, Ejaz W, Farmer H, Findor A, Gjoneska B, Gualda E, Huynh TLD, Imran MA, Israelashvili J, Kantorowicz-Reznichenko E, Krouwel A, Kutiyski Y, Laakasuo M, Lamm C, Levy J, Leygue C, Lin MJ, Mansoor MS, Marie A, Mayiwar L, Mazepus H, McHugh C, Olsson A, Otterbring T, Packer D, Palomäki J, Perry A, Petersen MB, Puthillam A, Rothmund T, Schmid PC, Stadelmann D, Stoica A, Stoyanov D, Stoyanova K, Tewari S, Todosijevic B, Torgler B, Tsakiris M, Tung HH, Umbre? RG, Vanags E, Vlasceanu M, Vonasch AJ, Zhang Y, Abad M, Adler E, Mdarhri HA, Antazo B, Ay FC, Ba MEH, Barbosa S, Bastian B, Berg A, Bialek M, Bilancini E, Bogatyreva N, Boncinelli L, Booth JE, Borau S, Buchel O, de Carvalho CF, Celadin T, Cerami C, Chalise HN, Cheng X, Cian L, Cockcroft K, Conway J, Córdoba-Delgado MA, Crespi C, Crouzevialle M, Cutler J, Cypryanska M, Dabrowska J, Davis VH, Minda JP, Dayley PN, Delouvée S, Denkovski O, Dezecache G, Dhaliwal NA, Diato A, Di Paolo R, Dulleck U, Ekmanis J, Etienne TW, Farhana HH, Farkhari F, Fidanovski K, Flew T, Fraser S, Frempong RB, Fugelsang J, Gale J, García-Navarro EB, Garladinne P, Gray K, Griffin SM, Gronfeldt B, Gruber J, Halperin E, Herzon V, Hruška M, Hudecek MFC, Isler O, Jangard S, Jørgensen F, Keudel O, Koppel L, Koverola M, Kunnari A, Leota J, Lermer E, Li C, Longoni C, McCashin D, Mikloušic I, Molina-Paredes J, Monroy-Fonseca C, Morales-Marente E, Moreau D, Muda R, Myer A, Nash K, Nitschke JP, Nurse MS, de Mello VO, Palacios-Galvez MS, Pan Y, Papp Z, Pärnamets P, Paruzel-Czachura M, Perander S, Pitman M, Raza A, Rêgo GG, Robertson C, Rodríguez-Pascual I, Saikkonen T, Salvador-Ginez O, Sampaio WM, Santi GC, Schultner D, Schutte E, Scott A, Skali A, Stefaniak A, Sternisko A, Strickland B, Thomas JP, Tinghög G, Traast IJ, Tucciarelli R, Tyrala M, Ungson ND, Uysal MS, Van Rooy D, Västfjäll D, Vieira JB, von Sikorski C, Walker AC, Watermeyer J, Willardt R, Wohl MJA, Wójcik AD, Wu K, Yamada Y, Yilmaz O, Yogeeswaran K, Ziemer CT, Zwaan RA, Boggio PS, Whillans A, Van Lange PAM, Prasad R, Onderco M, O'Madagain C, Nesh-Nash T, Laguna OM, Kubin E, Gümren M, Fenwick A, Ertan AS, Bernstein MJ, Amara H, Van Bavel JJ. PMID: 35990802; PMCID: PMC9381137.
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Integration of feature vectors from raw laboratory, medication and procedure names improves the precision and recall of models to predict postoperative mortality and acute kidney injury. Sci Rep. 2022 06 17; 12(1):10254. Hofer IS, Kupina M, Laddaran L, Halperin E. PMID: 35715454; PMCID: PMC9205878.
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The Apple Doesn't "Feel" Far From the Tree: Mother-Child Socialization of Intergroup Empathy. Pers Soc Psychol Bull. 2023 01; 49(1):3-19. Ran S, Reifen Tagar M, Tamir M, Halperin E. PMID: 35459413; PMCID: PMC9684659.
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Author Correction: National identity predicts public health support during a global pandemic. Nat Commun. 2022 Apr 06; 13(1):1949. Van Bavel JJ, Cichocka A, Capraro V, Sjåstad H, Nezlek JB, Pavlovic T, Alfano M, Gelfand MJ, Azevedo F, Birtel MD, Cislak A, Lockwood PL, Ross RM, Abts K, Agadullina E, Aruta JJB, Besharati SN, Bor A, Choma BL, Crabtree CD, Cunningham WA, De K, Ejaz W, Elbaek CT, Findor A, Flichtentrei D, Franc R, Gjoneska B, Gruber J, Gualda E, Horiuchi Y, Huynh TLD, Ibanez A, Imran MA, Israelashvili J, Jasko K, Kantorowicz J, Kantorowicz-Reznichenko E, Krouwel A, Laakasuo M, Lamm C, Leygue C, Lin MJ, Mansoor MS, Marie A, Mayiwar L, Mazepus H, McHugh C, Minda JP, Mitkidis P, Olsson A, Otterbring T, Packer DJ, Perry A, Petersen MB, Puthillam A, Riaño-Moreno JC, Rothmund T, Santamaría-García H, Schmid PC, Stoyanov D, Tewari S, Todosijevic B, Tsakiris M, Tung HH, Umbre? RG, Vanags E, Vlasceanu M, Vonasch A, Yucel M, Zhang Y, Abad M, Adler E, Akrawi N, Mdarhri HA, Amara H, Amodio DM, Antazo BG, Apps M, Ay FC, Ba MH, Barbosa S, Bastian B, Berg A, Bernal-Zárate MP, Bernstein M, Bialek M, Bilancini E, Bogatyreva N, Boncinelli L, Booth JE, Borau S, Buchel O, Cameron CD, Carvalho CF, Celadin T, Cerami C, Chalise HN, Cheng X, Cian L, Cockcroft K, Conway J, Córdoba-Delgado MA, Crespi C, Crouzevialle M, Cutler J, Cypryanska M, Dabrowska J, Daniels MA, Davis VH, Dayley PN, Delouvee S, Denkovski O, Dezecache G, Dhaliwal NA, Diato AB, Di Paolo R, Drosinou M, Dulleck U, Ekmanis J, Ertan AS, Etienne TW, Farhana HH, Farkhari F, Farmer H, Fenwick A, Fidanovski K, Flew T, Fraser S, Frempong RB, Fugelsang JA, Gale J, Garcia-Navarro EB, Garladinne P, Ghajjou O, Gkinopoulos T, Gray K, Griffin SM, Gronfeldt B, Gümren M, Gurung RL, Halperin E, Harris E, Herzon V, Hruška M, Huang G, Hudecek MFC, Isler O, Jangard S, Jørgensen FJ, Kachanoff F, Kahn J, Dangol AK, Keudel O, Koppel L, Koverola M, Kubin E, Kunnari A, Kutiyski Y, Laguna O, Leota J, Lermer E, Levy J, Levy N, Li C, Long EU, Longoni C, Maglic M, McCashin D, Metcalf AL, Mikloušic I, El Mimouni S, Miura A, Molina-Paredes J, Monroy-Fonseca C, Morales-Marente E, Moreau D, Muda R, Myer A, Nash K, Nesh-Nash T, Nitschke JP, Nurse MS, Ohtsubo Y, Oldemburgo de Mello V, O'Madagain C, Onderco M, Palacios-Galvez MS, Palomäki J, Pan Y, Papp Z, Pärnamets P, Paruzel-Czachura M, Pavlovic Z, Payán-Gómez C, Perander S, Pitman MM, Prasad R, Pyrkosz-Pacyna J, Rathje S, Raza A, Rêgo GG, Rhee K, Robertson CE, Rodríguez-Pascual I, Saikkonen T, Salvador-Ginez O, Sampaio WM, Santi GC, Santiago-Tovar N, Savage D, Scheffer JA, Schönegger P, Schultner DT, Schutte EM, Scott A, Sharma M, Sharma P, Skali A, Stadelmann D, Stafford CA, Stanojevic D, Stefaniak A, Sternisko A, Stoica A, Stoyanova KK, Strickland B, Sundvall J, Thomas JP, Tinghög G, Torgler B, Traast IJ, Tucciarelli R, Tyrala M, Ungson ND, Uysal MS, Van Lange PAM, van Prooijen JW, van Rooy D, Västfjäll D, Verkoeijen P, Vieira JB, von Sikorski C, Walker AC, Watermeyer J, Wetter E, Whillans A, Willardt R, Wohl MJA, Wójcik AD, Wu K, Yamada Y, Yilmaz O, Yogeeswaran K, Ziemer CT, Zwaan RA, Boggio PS. PMID: 35388016; PMCID: PMC8986871.
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Protest movements involving limited violence can sometimes be effective: Evidence from the 2020 BlackLivesMatter protests. Proc Natl Acad Sci U S A. 2022 04 05; 119(14):e2118990119. Shuman E, Hasan-Aslih S, van Zomeren M, Saguy T, Halperin E. PMID: 35344420; PMCID: PMC9168928.
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Shamed If You Do, Shamed If You Do Not: Group-Based Moral Emotions, Accountability, and Tolerance of Enemy Collateral Casualties. Front Psychol. 2022; 13:750548. Schori-Eyal N, Sobol-Sarag D, Shuman E, Halperin E. PMID: 35310217; PMCID: PMC8924286.
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Remote blood collection from older adults in the Brain Health Registry for plasma biomarker and genetic analysis. Alzheimers Dement. 2022 12; 18(12):2627-2636. Fockler J, Ashford MT, Eichenbaum J, Howell T, Ekanem A, Flenniken D, Happ A, Truran D, Mackin RS, Blennow K, Halperin E, Coppola G, Weiner MW, Nosheny RL. PMID: 35226409; PMCID: PMC9998146.
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Evaluating supervised and unsupervised background noise correction in human gut microbiome data. PLoS Comput Biol. 2022 02; 18(2):e1009838. Briscoe L, Balliu B, Sankararaman S, Halperin E, Garud NR. PMID: 35130266; PMCID: PMC8853548.
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National identity predicts public health support during a global pandemic. Nat Commun. 2022 01 26; 13(1):517. Van Bavel JJ, Cichocka A, Capraro V, Sjåstad H, Nezlek JB, Pavlovic T, Alfano M, Gelfand MJ, Azevedo F, Birtel MD, Cislak A, Lockwood PL, Ross RM, Abts K, Agadullina E, Aruta JJB, Besharati SN, Bor A, Choma BL, Crabtree CD, Cunningham WA, De K, Ejaz W, Elbaek CT, Findor A, Flichtentrei D, Franc R, Gjoneska B, Gruber J, Gualda E, Horiuchi Y, Huynh TLD, Ibanez A, Imran MA, Israelashvili J, Jasko K, Kantorowicz J, Kantorowicz-Reznichenko E, Krouwel A, Laakasuo M, Lamm C, Leygue C, Lin MJ, Mansoor MS, Marie A, Mayiwar L, Mazepus H, McHugh C, Minda JP, Mitkidis P, Olsson A, Otterbring T, Packer DJ, Perry A, Petersen MB, Puthillam A, Riaño-Moreno JC, Rothmund T, Santamaría-García H, Schmid PC, Stoyanov D, Tewari S, Todosijevic B, Tsakiris M, Tung HH, Umbre? RG, Vanags E, Vlasceanu M, Vonasch A, Yucel M, Zhang Y, Abad M, Adler E, Akrawi N, Mdarhri HA, Amara H, Amodio DM, Antazo BG, Apps M, Ay FC, Ba MH, Barbosa S, Bastian B, Berg A, Bernal-Zárate MP, Bernstein M, Bialek M, Bilancini E, Bogatyreva N, Boncinelli L, Booth JE, Borau S, Buchel O, Cameron CD, Carvalho CF, Celadin T, Cerami C, Chalise HN, Cheng X, Cian L, Cockcroft K, Conway J, Córdoba-Delgado MA, Crespi C, Crouzevialle M, Cutler J, Cypryanska M, Dabrowska J, Daniels MA, Davis VH, Dayley PN, Delouvee S, Denkovski O, Dezecache G, Dhaliwal NA, Diato AB, Di Paolo R, Drosinou M, Dulleck U, Ekmanis J, Ertan AS, Etienne TW, Farhana HH, Farkhari F, Farmer H, Fenwick A, Fidanovski K, Flew T, Fraser S, Frempong RB, Fugelsang JA, Gale J, Garcia-Navarro EB, Garladinne P, Ghajjou O, Gkinopoulos T, Gray K, Griffin SM, Gronfeldt B, Gümren M, Gurung RL, Halperin E, Harris E, Herzon V, Hruška M, Huang G, Hudecek MFC, Isler O, Jangard S, Jørgensen FJ, Kachanoff F, Kahn J, Dangol AK, Keudel O, Koppel L, Koverola M, Kubin E, Kunnari A, Kutiyski Y, Laguna O, Leota J, Lermer E, Levy J, Levy N, Li C, Long EU, Longoni C, Maglic M, McCashin D, Metcalf AL, Mikloušic I, El Mimouni S, Miura A, Molina-Paredes J, Monroy-Fonseca C, Morales-Marente E, Moreau D, Muda R, Myer A, Nash K, Nesh-Nash T, Nitschke JP, Nurse MS, Ohtsubo Y, Oldemburgo de Mello V, O'Madagain C, Onderco M, Palacios-Galvez MS, Palomäki J, Pan Y, Papp Z, Pärnamets P, Paruzel-Czachura M, Pavlovic Z, Payán-Gómez C, Perander S, Pitman MM, Prasad R, Pyrkosz-Pacyna J, Rathje S, Raza A, Rêgo GG, Rhee K, Robertson CE, Rodríguez-Pascual I, Saikkonen T, Salvador-Ginez O, Sampaio WM, Santi GC, Santiago-Tovar N, Savage D, Scheffer JA, Schönegger P, Schultner DT, Schutte EM, Scott A, Sharma M, Sharma P, Skali A, Stadelmann D, Stafford CA, Stanojevic D, Stefaniak A, Sternisko A, Stoica A, Stoyanova KK, Strickland B, Sundvall J, Thomas JP, Tinghög G, Torgler B, Traast IJ, Tucciarelli R, Tyrala M, Ungson ND, Uysal MS, Van Lange PAM, van Prooijen JW, van Rooy D, Västfjäll D, Verkoeijen P, Vieira JB, von Sikorski C, Walker AC, Watermeyer J, Wetter E, Whillans A, Willardt R, Wohl MJA, Wójcik AD, Wu K, Yamada Y, Yilmaz O, Yogeeswaran K, Ziemer CT, Zwaan RA, Boggio PS. PMID: 35082277; PMCID: PMC8792004.
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The Effect of Model Directionality on Cell-Type-Specific Differential DNA Methylation Analysis. Front Bioinform. 2021; 1:792605. Rahmani E, Jew B, Halperin E. PMID: 36303752; PMCID: PMC9580934.
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Personal experience with Covid-19 is associated with increased environmental concern and pro-environmental behavioral intentions. Curr Res Ecol Soc Psychol. 2022; 3:100031. Shulman D, Halperin E, Reifen-Tagar M. PMID: 35098190; PMCID: PMC8720047.
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A social virus: Intergroup dehumanization and unwillingness to aid amidst COVID-19 - Who are the main targets? Int J Intercult Relat. 2022 Jan; 86:109-121. Adler E, Hebel-Sela S, Leshem OA, Levy J, Halperin E. PMID: 34866714; PMCID: PMC8629726.
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The Role of Witnesses in Humiliation: Why Does the Presence of an Audience Facilitate Humiliation Among Victims of Devaluation? Pers Soc Psychol Bull. 2023 01; 49(1):32-47. Fernández S, Saguy T, Gaviria E, Agudo R, Halperin E. PMID: 34802330.
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Imputation of the continuous arterial line blood pressure waveform from non-invasive measurements using deep learning. Sci Rep. 2021 08 03; 11(1):15755. Hill BL, Rakocz N, Rudas Á, Chiang JN, Wang S, Hofer I, Cannesson M, Halperin E. PMID: 34344934; PMCID: PMC8333060.
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The rise of affectivism. Nat Hum Behav. 2021 07; 5(7):816-820. Dukes D, Abrams K, Adolphs R, Ahmed ME, Beatty A, Berridge KC, Broomhall S, Brosch T, Campos JJ, Clay Z, Clément F, Cunningham WA, Damasio A, Damasio H, D'Arms J, Davidson JW, de Gelder B, Deonna J, de Sousa R, Ekman P, Ellsworth PC, Fehr E, Fischer A, Foolen A, Frevert U, Grandjean D, Gratch J, Greenberg L, Greenspan P, Gross JJ, Halperin E, Kappas A, Keltner D, Knutson B, Konstan D, Kret ME, LeDoux JE, Lerner JS, Levenson RW, Loewenstein G, Manstead ASR, Maroney TA, Moors A, Niedenthal P, Parkinson B, Pavlidis I, Pelachaud C, Pollak SD, Pourtois G, Roettger-Roessler B, Russell JA, Sauter D, Scarantino A, Scherer KR, Stearns P, Stets JE, Tappolet C, Teroni F, Tsai J, Turner J, Reekum CV, Vuilleumier P, Wharton T, Sander D. PMID: 34112980; PMCID: PMC8319089.
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Bladder Cancer Immunotherapy by BCG Is Associated with a Significantly Reduced Risk of Alzheimer's Disease and Parkinson's Disease. Vaccines (Basel). 2021 May 11; 9(5). Klinger D, Hill BL, Barda N, Halperin E, Gofrit ON, Greenblatt CL, Rappoport N, Linial M, Bercovier H. PMID: 34064775; PMCID: PMC8151667.
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Automated identification of clinical features from sparsely annotated 3-dimensional medical imaging. NPJ Digit Med. 2021 Mar 08; 4(1):44. Rakocz N, Chiang JN, Nittala MG, Corradetti G, Tiosano L, Velaga S, Thompson M, Hill BL, Sankararaman S, Haines JL, Pericak-Vance MA, Stambolian D, Sadda SR, Halperin E. PMID: 33686212; PMCID: PMC7940637.
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Discharge Clinical Characteristics and Post-Discharge Events in Patients with Severe COVID-19: A Descriptive Case Series. J Gen Intern Med. 2021 Apr; 36(4):1017-1022. Saab FG, Chiang JN, Brook R, Adamson PC, Fulcher JA, Halperin E, Manuel V, Goodman-Meza D. PMID: 33532963; PMCID: PMC7853705.
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Optimized design of single-cell RNA sequencing experiments for cell-type-specific eQTL analysis. Nat Commun. 2020 10 30; 11(1):5504. Mandric I, Schwarz T, Majumdar A, Hou K, Briscoe L, Perez R, Subramaniam M, Hafemeister C, Satija R, Ye CJ, Pasaniuc B, Halperin E. PMID: 33127880; PMCID: PMC7599215.
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A machine learning algorithm to increase COVID-19 inpatient diagnostic capacity. PLoS One. 2020; 15(9):e0239474. Goodman-Meza D, Rudas A, Chiang JN, Adamson PC, Ebinger J, Sun N, Botting P, Fulcher JA, Saab FG, Brook R, Eskin E, An U, Kordi M, Jew B, Balliu B, Chen Z, Hill BL, Rahmani E, Halperin E, Manuel V. PMID: 32960917; PMCID: PMC7508387.
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The causal effect of obesity on prediabetes and insulin resistance reveals the important role of adipose tissue in insulin resistance. PLoS Genet. 2020 09; 16(9):e1009018. Miao Z, Alvarez M, Ko A, Bhagat Y, Rahmani E, Jew B, Heinonen S, Muñoz-Hernandez LL, Herrera-Hernandez M, Aguilar-Salinas C, Tusie-Luna T, Mohlke KL, Laakso M, Pietiläinen KH, Halperin E, Pajukanta P. PMID: 32925908; PMCID: PMC7515203.
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Context-aware dimensionality reduction deconvolutes gut microbial community dynamics. Nat Biotechnol. 2021 02; 39(2):165-168. Martino C, Shenhav L, Marotz CA, Armstrong G, McDonald D, Vázquez-Baeza Y, Morton JT, Jiang L, Dominguez-Bello MG, Swafford AD, Halperin E, Knight R. PMID: 32868914; PMCID: PMC7878194.
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Lay theories of peace and their influence on policy preference during violent conflict. Proc Natl Acad Sci U S A. 2020 08 04; 117(31):18378-18384. Leshem OA, Halperin E. PMID: 32690675; PMCID: PMC7414054.
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Enhancing droplet-based single-nucleus RNA-seq resolution using the semi-supervised machine learning classifier DIEM. Sci Rep. 2020 07 03; 10(1):11019. Alvarez M, Rahmani E, Jew B, Garske KM, Miao Z, Benhammou JN, Ye CJ, Pisegna JR, Pietiläinen KH, Halperin E, Pajukanta P. PMID: 32620816; PMCID: PMC7335186.
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With or without you: The paradoxical role of identification in predicting joint and ingroup collective action in intergroup conflict. Eur J Soc Psychol. 2020 Oct; 50(6):1334-1343. Hasan-Aslih S, Shuman E, Pliskin R, van Zomeren M, Saguy T, Halperin E. PMID: 33362306; PMCID: PMC7754399.
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Publisher Correction: Accurate estimation of cell composition in bulk expression through robust integration of single-cell information. Nat Commun. 2020 06 03; 11(1):2891. Jew B, Alvarez M, Rahmani E, Miao Z, Ko A, Garske KM, Sul JH, Pietiläinen KH, Pajukanta P, Halperin E. PMID: 32493922; PMCID: PMC7270096.
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Compositional Lotka-Volterra describes microbial dynamics in the simplex. PLoS Comput Biol. 2020 05; 16(5):e1007917. Joseph TA, Shenhav L, Xavier JB, Halperin E, Pe'er I. PMID: 32469867; PMCID: PMC7325845.
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Scalable probabilistic PCA for large-scale genetic variation data. PLoS Genet. 2020 05; 16(5):e1008773. Agrawal A, Chiu AM, Le M, Halperin E, Sankararaman S. PMID: 32469896; PMCID: PMC7286535.
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BATMAN: Fast and Accurate Integration of Single-Cell RNA-Seq Datasets via Minimum-Weight Matching. iScience. 2020 Jun 26; 23(6):101185. Mandric I, Hill BL, Freund MK, Thompson M, Halperin E. PMID: 32504875; PMCID: PMC7276436.
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Accurate estimation of cell composition in bulk expression through robust integration of single-cell information. Nat Commun. 2020 04 24; 11(1):1971. Jew B, Alvarez M, Rahmani E, Miao Z, Ko A, Garske KM, Sul JH, Pietiläinen KH, Pajukanta P, Halperin E. PMID: 32332754; PMCID: PMC7181686.
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Stochasticity constrained by deterministic effects of diet and age drive rumen microbiome assembly dynamics. Nat Commun. 2020 04 20; 11(1):1904. Furman O, Shenhav L, Sasson G, Kokou F, Honig H, Jacoby S, Hertz T, Cordero OX, Halperin E, Mizrahi I. PMID: 32312972; PMCID: PMC7170844.
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Developing ReApp: an emotion regulation mobile intervention for intergroup conflict. Cogn Emot. 2020 11; 34(7):1326-1342. Porat R, Erel L, Pnueli V, Halperin E. PMID: 32264755.
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Exposure to Analogous Harmdoing Increases Acknowledgment of Ingroup Transgressions in Intergroup Conflicts. Pers Soc Psychol Bull. 2020 12; 46(12):1649-1664. Shulman D, Halperin E, Kessler T, Schori-Eyal N, Reifen Tagar M. PMID: 32188334.
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Association of a Variant in VWA3A with Response to Anti-Vascular Endothelial Growth Factor Treatment in Neovascular AMD. Invest Ophthalmol Vis Sci. 2020 02 07; 61(2):48. Grunin M, Beykin G, Rahmani E, Schweiger R, Barel G, Hagbi-Levi S, Elbaz-Hayoun S, Rinsky B, Ganiel M, Carmi S, Halperin E, Chowers I. PMID: 32106291; PMCID: PMC7329947.
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Unravelling plasmidome distribution and interaction with its hosting microbiome. Environ Microbiol. 2020 01; 22(1):32-44. Brown Kav A, Rozov R, Bogumil D, Sørensen SJ, Hansen LH, Benhar I, Halperin E, Shamir R, Mizrahi I. PMID: 31602783.
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An automated machine learning-based model predicts postoperative mortality using readily-extractable preoperative electronic health record data. Br J Anaesth. 2019 12; 123(6):877-886. Hill BL, Brown R, Gabel E, Rakocz N, Lee C, Cannesson M, Baldi P, Olde Loohuis L, Johnson R, Jew B, Maoz U, Mahajan A, Sankararaman S, Hofer I, Halperin E. PMID: 31627890; PMCID: PMC6883494.
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The enemy's gaze: Immersive virtual environments enhance peace promoting attitudes and emotions in violent intergroup conflicts. PLoS One. 2019; 14(9):e0222342. Hasson Y, Schori-Eyal N, Landau D, Hasler BS, Levy J, Friedman D, Halperin E. PMID: 31509584; PMCID: PMC6738917.
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Cell-type-specific resolution epigenetics without the need for cell sorting or single-cell biology. Nat Commun. 2019 07 31; 10(1):3417. Rahmani E, Schweiger R, Rhead B, Criswell LA, Barcellos LF, Eskin E, Rosset S, Sankararaman S, Halperin E. PMID: 31366909; PMCID: PMC6668473.
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CONFINED: distinguishing biological from technical sources of variation by leveraging multiple methylation datasets. Genome Biol. 2019 07 12; 20(1):138. Thompson M, Chen ZJ, Rahmani E, Halperin E. PMID: 31300005; PMCID: PMC6624895.
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A heritable subset of the core rumen microbiome dictates dairy cow productivity and emissions. Sci Adv. 2019 07; 5(7):eaav8391. Wallace RJ, Sasson G, Garnsworthy PC, Tapio I, Gregson E, Bani P, Huhtanen P, Bayat AR, Strozzi F, Biscarini F, Snelling TJ, Saunders N, Potterton SL, Craigon J, Minuti A, Trevisi E, Callegari ML, Cappelli FP, Cabezas-Garcia EH, Vilkki J, Pinares-Patino C, Fliegerová KO, Mrázek J, Sechovcová H, Kopecný J, Bonin A, Boyer F, Taberlet P, Kokou F, Halperin E, Williams JL, Shingfield KJ, Mizrahi I. PMID: 31281883; PMCID: PMC6609165.
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Modeling the temporal dynamics of the gut microbial community in adults and infants. PLoS Comput Biol. 2019 06; 15(6):e1006960. Shenhav L, Furman O, Briscoe L, Thompson M, Silverman JD, Mizrahi I, Halperin E. PMID: 31246943; PMCID: PMC6597035.
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FEAST: fast expectation-maximization for microbial source tracking. Nat Methods. 2019 07; 16(7):627-632. Shenhav L, Thompson M, Joseph TA, Briscoe L, Furman O, Bogumil D, Mizrahi I, Pe'er I, Halperin E. PMID: 31182859; PMCID: PMC8535041.
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Increase of body mass index and waist circumference predicts development of metabolic syndrome criteria in apparently healthy individuals with 2 and 5 years follow-up. Int J Obes (Lond). 2019 04; 43(4):800-807. Fisher E, Brzezinski RY, Ehrenwald M, Shapira I, Zeltser D, Berliner S, Marcus Y, Shefer G, Stern N, Rogowski O, Halperin E, Rosset S, Shenhar-Tsarfaty S. PMID: 30647453.
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Detecting heritable phenotypes without a model using fast permutation testing for heritability and set-tests. Nat Commun. 2018 11 21; 9(1):4919. Schweiger R, Fisher E, Weissbrod O, Rahmani E, Müller-Nurasyid M, Kunze S, Gieger C, Waldenberger M, Rosset S, Halperin E. PMID: 30464216; PMCID: PMC6249264.
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Opening the Black Box: Understanding the Science Behind Big Data and Predictive Analytics. Anesth Analg. 2018 11; 127(5):1139-1143. Hofer IS, Halperin E, Cannesson M. PMID: 29847384.
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BayesCCE: a Bayesian framework for estimating cell-type composition from DNA methylation without the need for methylation reference. Genome Biol. 2018 09 21; 19(1):141. Rahmani E, Schweiger R, Shenhav L, Wingert T, Hofer I, Gabel E, Eskin E, Halperin E. PMID: 30241486; PMCID: PMC6151042.
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Using Stochastic Approximation Techniques to Efficiently Construct Confidence Intervals for Heritability. J Comput Biol. 2018 07; 25(7):794-808. Schweiger R, Fisher E, Rahmani E, Shenhav L, Rosset S, Halperin E. PMID: 29932739.
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Are Liberals and Conservatives Equally Motivated to Feel Empathy Toward Others? Pers Soc Psychol Bull. 2018 10; 44(10):1449-1459. Hasson Y, Tamir M, Brahms KS, Cohrs JC, Halperin E. PMID: 29739293.
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Motivated emotion and the rally around the flag effect: liberals are motivated to feel collective angst (like conservatives) when faced with existential threat. Cogn Emot. 2019 05; 33(3):480-491. Porat R, Tamir M, Wohl MJA, Gur T, Halperin E. PMID: 29667484.
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CRISPys: Optimal sgRNA Design for Editing Multiple Members of a Gene Family Using the CRISPR System. J Mol Biol. 2018 Jul 20; 430(15):2184-2195. Hyams G, Abadi S, Lahav S, Avni A, Halperin E, Shani E, Mayrose I. PMID: 29625203.
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Deciphering genetic factors that determine melon fruit-quality traits using RNA-Seq-based high-resolution QTL and eQTL mapping. Plant J. 2018 04; 94(1):169-191. Galpaz N, Gonda I, Shem-Tov D, Barad O, Tzuri G, Lev S, Fei Z, Xu Y, Mao L, Jiao C, Harel-Beja R, Doron-Faigenboim A, Tzfadia O, Bar E, Meir A, Sa'ar U, Fait A, Halperin E, Kenigswald M, Fallik E, Lombardi N, Kol G, Ronen G, Burger Y, Gur A, Tadmor Y, Portnoy V, Schaffer AA, Lewinsohn E, Giovannoni JJ, Katzir N. PMID: 29385635.
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Testing the impact and durability of a group malleability intervention in the context of the Israeli-Palestinian conflict. Proc Natl Acad Sci U S A. 2018 01 23; 115(4):696-701. Goldenberg A, Cohen-Chen S, Goyer JP, Dweck CS, Gross JJ, Halperin E. PMID: 29311299; PMCID: PMC5789904.
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Faucet: streaming de novo assembly graph construction. Bioinformatics. 2018 01 01; 34(1):147-154. Rozov R, Goldshlager G, Halperin E, Shamir R. PMID: 29036597; PMCID: PMC5870852.
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An ancestry-based approach for detecting interactions. Genet Epidemiol. 2018 02; 42(1):49-63. Park DS, Eskin I, Kang EY, Gamazon ER, Eng C, Gignoux CR, Galanter JM, Burchard E, Ye CJ, Aschard H, Eskin E, Halperin E, Zaitlen N. PMID: 29114909; PMCID: PMC6065511.
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RL-SKAT: An Exact and Efficient Score Test for Heritability and Set Tests. Genetics. 2017 12; 207(4):1275-1283. Schweiger R, Weissbrod O, Rahmani E, Müller-Nurasyid M, Kunze S, Gieger C, Waldenberger M, Rosset S, Halperin E. PMID: 29025915; PMCID: PMC5714447.
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Heritable Bovine Rumen Bacteria Are Phylogenetically Related and Correlated with the Cow's Capacity To Harvest Energy from Its Feed. mBio. 2017 08 15; 8(4). Sasson G, Kruger Ben-Shabat S, Seroussi E, Doron-Faigenboim A, Shterzer N, Yaacoby S, Berg Miller ME, White BA, Halperin E, Mizrahi I. PMID: 28811339; PMCID: PMC5559629.
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Support for redistribution is shaped by compassion, envy, and self-interest, but not a taste for fairness. Proc Natl Acad Sci U S A. 2017 08 01; 114(31):8420-8425. Sznycer D, Lopez Seal MF, Sell A, Lim J, Porat R, Shalvi S, Halperin E, Cosmides L, Tooby J. PMID: 28716928; PMCID: PMC5547621.
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Association testing of bisulfite-sequencing methylation data via a Laplace approximation. Bioinformatics. 2017 Jul 15; 33(14):i325-i332. Weissbrod O, Rahmani E, Schweiger R, Rosset S, Halperin E. PMID: 28881982; PMCID: PMC5870555.
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GLINT: a user-friendly toolset for the analysis of high-throughput DNA-methylation array data. Bioinformatics. 2017 Jun 15; 33(12):1870-1872. Rahmani E, Yedidim R, Shenhav L, Schweiger R, Weissbrod O, Zaitlen N, Halperin E. PMID: 28177067; PMCID: PMC5870777.
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Rheumatoid Arthritis Naive T Cells Share Hypermethylation Sites With Synoviocytes. Arthritis Rheumatol. 2017 03; 69(3):550-559. Rhead B, Holingue C, Cole M, Shao X, Quach HL, Quach D, Shah K, Sinclair E, Graf J, Link T, Harrison R, Rahmani E, Halperin E, Wang W, Firestein GS, Barcellos LF, Criswell LA. PMID: 27723282; PMCID: PMC5328845.
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Correcting for cell-type heterogeneity in DNA methylation: a comprehensive evaluation. Nat Methods. 2017 02 28; 14(3):218-219. Rahmani E, Zaitlen N, Baran Y, Eng C, Hu D, Galanter J, Oh S, Burchard EG, Eskin E, Zou J, Halperin E. PMID: 28245214; PMCID: PMC5548185.
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Recycler: an algorithm for detecting plasmids from de novo assembly graphs. Bioinformatics. 2017 02 15; 33(4):475-482. Rozov R, Brown Kav A, Bogumil D, Shterzer N, Halperin E, Mizrahi I, Shamir R. PMID: 28003256; PMCID: PMC5408804.
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Genome-wide methylation data mirror ancestry information. Epigenetics Chromatin. 2017; 10:1. Rahmani E, Shenhav L, Schweiger R, Yousefi P, Huen K, Eskenazi B, Eng C, Huntsman S, Hu D, Galanter J, Oh SS, Waldenberger M, Strauch K, Grallert H, Meitinger T, Gieger C, Holland N, Burchard EG, Zaitlen N, Halperin E. PMID: 28149326; PMCID: PMC5267476.
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The Effects of Migration and Assortative Mating on Admixture Linkage Disequilibrium. Genetics. 2017 01; 205(1):375-383. Zaitlen N, Huntsman S, Hu D, Spear M, Eng C, Oh SS, White MJ, Mak A, Davis A, Meade K, Brigino-Buenaventura E, LeNoir MA, Bibbins-Domingo K, Burchard EG, Halperin E. PMID: 27879348; PMCID: PMC5223515.
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Moderating attitudes in times of violence through paradoxical thinking intervention. Proc Natl Acad Sci U S A. 2016 10 25; 113(43):12105-12110. Hameiri B, Porat R, Bar-Tal D, Halperin E. PMID: 27790995; PMCID: PMC5087039.
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Successful emotion regulation requires both conviction and skill: beliefs about the controllability of emotions, reappraisal, and regulation success. Cogn Emot. 2017 09; 31(6):1225-1233. Gutentag T, Halperin E, Porat R, Bigman YE, Tamir M. PMID: 27494261.
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The genetic history of Cochin Jews from India. Hum Genet. 2016 10; 135(10):1127-43. Waldman YY, Biddanda A, Dubrovsky M, Campbell CL, Oddoux C, Friedman E, Atzmon G, Halperin E, Ostrer H, Keinan A. PMID: 27377974; PMCID: PMC5020127.
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Disappointment expression evokes collective guilt and collective action in intergroup conflict: the moderating role of legitimacy perceptions. Cogn Emot. 2017 09; 31(6):1112-1126. Solak N, Reifen Tagar M, Cohen-Chen S, Saguy T, Halperin E. PMID: 27351316.
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Fast and Accurate Construction of Confidence Intervals for Heritability. Am J Hum Genet. 2016 06 02; 98(6):1181-1192. Schweiger R, Kaufman S, Laaksonen R, Kleber ME, März W, Eskin E, Rosset S, Halperin E. PMID: 27259052; PMCID: PMC4908190.
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Sparse PCA corrects for cell type heterogeneity in epigenome-wide association studies. Nat Methods. 2016 05; 13(5):443-5. Rahmani E, Zaitlen N, Baran Y, Eng C, Hu D, Galanter J, Oh S, Burchard EG, Eskin E, Zou J, Halperin E. PMID: 27018579; PMCID: PMC5548182.
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The Genetics of Bene Israel from India Reveals Both Substantial Jewish and Indian Ancestry. PLoS One. 2016; 11(3):e0152056. Waldman YY, Biddanda A, Davidson NR, Billing-Ross P, Dubrovsky M, Campbell CL, Oddoux C, Friedman E, Atzmon G, Halperin E, Ostrer H, Keinan A. PMID: 27010569; PMCID: PMC4806850.
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Shame closely tracks the threat of devaluation by others, even across cultures. Proc Natl Acad Sci U S A. 2016 Mar 08; 113(10):2625-30. Sznycer D, Tooby J, Cosmides L, Porat R, Shalvi S, Halperin E. PMID: 26903649; PMCID: PMC4790975.
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Characterization of whole-genome autosomal differences of DNA methylation between men and women. Epigenetics Chromatin. 2015; 8:43. Singmann P, Shem-Tov D, Wahl S, Grallert H, Fiorito G, Shin SY, Schramm K, Wolf P, Kunze S, Baran Y, Guarrera S, Vineis P, Krogh V, Panico S, Tumino R, Kretschmer A, Gieger C, Peters A, Prokisch H, Relton CL, Matullo G, Illig T, Waldenberger M, Halperin E. PMID: 26500701; PMCID: PMC4615866.
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Genetic and socioeconomic study of mate choice in Latinos reveals novel assortment patterns. Proc Natl Acad Sci U S A. 2015 Nov 03; 112(44):13621-6. Zou JY, Park DS, Burchard EG, Torgerson DG, Pino-Yanes M, Song YS, Sankararaman S, Halperin E, Zaitlen N. PMID: 26483472; PMCID: PMC4640764.
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Unfreezing cognitions during an intractable conflict: Does an external incentive for negotiating peace and (low levels of) collective angst increase information seeking? Br J Soc Psychol. 2016 Mar; 55(1):65-87. Wohl MJ, Porat R, Halperin E. PMID: 26206170.
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A Note on the Relations Between Spatio-Genetic Models. J Comput Biol. 2015 Oct; 22(10):905-17. Baran Y, Halperin E. PMID: 26083718.
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Inferring parental genomic ancestries using pooled semi-Markov processes. Bioinformatics. 2015 Jun 15; 31(12):i190-6. Zou JY, Halperin E, Burchard E, Sankararaman S. PMID: 26072482; PMCID: PMC4765873.
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The Process Model of Group-Based Emotion: Integrating Intergroup Emotion and Emotion Regulation Perspectives. Pers Soc Psychol Rev. 2016 May; 20(2):118-41. Goldenberg A, Halperin E, van Zomeren M, Gross JJ. PMID: 25870386.
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Are leftists more emotion-driven than rightists? The interactive influence of ideology and emotions on support for policies. Pers Soc Psychol Bull. 2014 Dec; 40(12):1681-97. Pliskin R, Bar-Tal D, Sheppes G, Halperin E. PMID: 25381287.
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Fast lossless compression via cascading Bloom filters. BMC Bioinformatics. 2014; 15 Suppl 9:S7. Rozov R, Shamir R, Halperin E. PMID: 25252952; PMCID: PMC4168706.
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Paradoxical thinking as a new avenue of intervention to promote peace. Proc Natl Acad Sci U S A. 2014 Jul 29; 111(30):10996-1001. Hameiri B, Porat R, Bar-Tal D, Bieler A, Halperin E. PMID: 25024185; PMCID: PMC4121792.
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Historical pedigree reconstruction from extant populations using PArtitioning of RElatives (PREPARE). PLoS Comput Biol. 2014 Jun; 10(6):e1003610. Shem-Tov D, Halperin E. PMID: 24945698; PMCID: PMC4063675.
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EPIQ-efficient detection of SNP-SNP epistatic interactions for quantitative traits. Bioinformatics. 2014 Jun 15; 30(12):i19-25. Arkin Y, Rahmani E, Kleber ME, Laaksonen R, März W, Halperin E. PMID: 24931983; PMCID: PMC4229902.
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An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biol. 2014 Mar 25; 15(3):R53. Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, DeChene ET, Towne MC, Savage SK, Price EN, Holm IA, Luquette LJ, Lyon E, Majzoub J, Neupert P, McCallie D, Szolovits P, Willard HF, Mendelsohn NJ, Temme R, Finkel RS, Yum SW, Medne L, Sunyaev SR, Adzhubey I, Cassa CA, de Bakker PI, Duzkale H, Dworzynski P, Fairbrother W, Francioli L, Funke BH, Giovanni MA, Handsaker RE, Lage K, Lebo MS, Lek M, Leshchiner I, MacArthur DG, McLaughlin HM, Murray MF, Pers TH, Polak PP, Raychaudhuri S, Rehm HL, Soemedi R, Stitziel NO, Vestecka S, Supper J, Gugenmus C, Klocke B, Hahn A, Schubach M, Menzel M, Biskup S, Freisinger P, Deng M, Braun M, Perner S, Smith RJ, Andorf JL, Huang J, Ryckman K, Sheffield VC, Stone EM, Bair T, Black-Ziegelbein EA, Braun TA, Darbro B, DeLuca AP, Kolbe DL, Scheetz TE, Shearer AE, Sompallae R, Wang K, Bassuk AG, Edens E, Mathews K, Moore SA, Shchelochkov OA, Trapane P, Bossler A, Campbell CA, Heusel JW, Kwitek A, Maga T, Panzer K, Wassink T, Van Daele D, Azaiez H, Booth K, Meyer N, Segal MM, Williams MS, Tromp G, White P, Corsmeier D, Fitzgerald-Butt S, Herman G, Lamb-Thrush D, McBride KL, Newsom D, Pierson CR, Rakowsky AT, Maver A, Lovrecic L, Palandacic A, Peterlin B, Torkamani A, Wedell A, Huss M, Alexeyenko A, Lindvall JM, Magnusson M, Nilsson D, Stranneheim H, Taylan F, Gilissen C, Hoischen A, van Bon B, Yntema H, Nelen M, Zhang W, Sager J, Zhang L, Blair K, Kural D, Cariaso M, Lennon GG, Javed A, Agrawal S, Ng PC, Sandhu KS, Krishna S, Veeramachaneni V, Isakov O, Halperin E, Friedman E, Shomron N, Glusman G, Roach JC, Caballero J, Cox HC, Mauldin D, Ament SA, Rowen L, Richards DR, San Lucas FA, Gonzalez-Garay ML, Caskey CT, Bai Y, Huang Y, Fang F, Zhang Y, Wang Z, Barrera J, Garcia-Lobo JM, González-Lamuño D, Llorca J, Rodriguez MC, Varela I, Reese MG, De La Vega FM, Kiruluta E, Cargill M, Hart RK, Sorenson JM, Lyon GJ, Stevenson DA, Bray BE, Moore BM, Eilbeck K, Yandell M, Zhao H, Hou L, Chen X, Yan X, Chen M, Li C, Yang C, Gunel M, Li P, Kong Y, Alexander AC, Albertyn ZI, Boycott KM, Bulman DE, Gordon PM, Innes AM, Knoppers BM, Majewski J, Marshall CR, Parboosingh JS, Sawyer SL, Samuels ME, Schwartzentruber J, Kohane IS, Margulies DM. PMID: 24667040; PMCID: PMC4073084.
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No evidence from genome-wide data of a Khazar origin for the Ashkenazi Jews. Hum Biol. 2013 Dec; 85(6):859-900. Behar DM, Metspalu M, Baran Y, Kopelman NM, Yunusbayev B, Gladstein A, Tzur S, Sahakyan H, Bahmanimehr A, Yepiskoposyan L, Tambets K, Khusnutdinova EK, Kushniarevich A, Balanovsky O, Balanovsky E, Kovacevic L, Marjanovic D, Mihailov E, Kouvatsi A, Triantaphyllidis C, King RJ, Semino O, Torroni A, Hammer MF, Metspalu E, Skorecki K, Rosset S, Halperin E, Villems R, Rosenberg NA. PMID: 25079123.
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eALPS: estimating abundance levels in pooled sequencing using available genotyping data. J Comput Biol. 2013 Nov; 20(11):861-77. Eskin I, Hormozdiari F, Conde L, Riby J, Skibola CF, Eskin E, Halperin E. PMID: 24144111; PMCID: PMC4013753.
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Learning natural selection from the site frequency spectrum. Genetics. 2013 Sep; 195(1):181-93. Ronen R, Udpa N, Halperin E, Bafna V. PMID: 23770700; PMCID: PMC3761300.
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Enhanced localization of genetic samples through linkage-disequilibrium correction. Am J Hum Genet. 2013 Jun 06; 92(6):882-94. Baran Y, Quintela I, Carracedo A, Pasaniuc B, Halperin E. PMID: 23726367; PMCID: PMC3675263.
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Rare variant association testing under low-coverage sequencing. Genetics. 2013 Jul; 194(3):769-79. Navon O, Sul JH, Han B, Conde L, Bracci PM, Riby J, Skibola CF, Eskin E, Halperin E. PMID: 23636738; PMCID: PMC3697979.
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Analysis of Latino populations from GALA and MEC studies reveals genomic loci with biased local ancestry estimation. Bioinformatics. 2013 Jun 01; 29(11):1407-15. Pasaniuc B, Sankararaman S, Torgerson DG, Gignoux C, Zaitlen N, Eng C, Rodriguez-Cintron W, Chapela R, Ford JG, Avila PC, Rodriguez-Santana J, Chen GK, Le Marchand L, Henderson B, Reich D, Haiman CA, Gonzàlez Burchard E, Halperin E. PMID: 23572411; PMCID: PMC3661056.
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CNVeM: copy number variation detection using uncertainty of read mapping. J Comput Biol. 2013 Mar; 20(3):224-36. Wang Z, Hormozdiari F, Yang WY, Halperin E, Eskin E. PMID: 23421794; PMCID: PMC3590897.
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Probabilistic inference of viral quasispecies subject to recombination. J Comput Biol. 2013 Feb; 20(2):113-23. Töpfer A, Zagordi O, Prabhakaran S, Roth V, Halperin E, Beerenwinkel N. PMID: 23383997; PMCID: PMC3576916.
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PRRC2A and BCL2L11 gene variants influence risk of non-Hodgkin lymphoma: results from the InterLymph consortium. Blood. 2012 Nov 29; 120(23):4645-8. Nieters A, Conde L, Slager SL, Brooks-Wilson A, Morton L, Skibola DR, Novak AJ, Riby J, Ansell SM, Halperin E, Shanafelt TD, Agana L, Wang AH, De Roos AJ, Severson RK, Cozen W, Spinelli J, Butterbach K, Becker N, de Sanjose S, Benavente Y, Cocco P, Staines A, Maynadié M, Foretova L, Boffetta P, Brennan P, Lan Q, Zhang Y, Zheng T, Purdue M, Armstrong B, Kricker A, Vajdic CM, Grulich A, Smith MT, Bracci PM, Chanock SJ, Hartge P, Cerhan JR, Wang SS, Rothman N, Skibola CF. PMID: 23047821; PMCID: PMC3512239.
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Common variation at 6p21.31 (BAK1) influences the risk of chronic lymphocytic leukemia. Blood. 2012 Jul 26; 120(4):843-6. Slager SL, Skibola CF, Di Bernardo MC, Conde L, Broderick P, McDonnell SK, Goldin LR, Croft N, Holroyd A, Harris S, Riby J, Serie DJ, Kay NE, Call TG, Bracci PM, Halperin E, Lanasa MC, Cunningham JM, Leis JF, Morrison VA, Spector LG, Vachon CM, Shanafelt TD, Strom SS, Camp NJ, Weinberg JB, Matutes E, Caporaso NE, Wade R, Dyer MJ, Dearden C, Cerhan JR, Catovsky D, Houlston RS. PMID: 22700719; PMCID: PMC3412347.
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A model-based approach for analysis of spatial structure in genetic data. Nat Genet. 2012 May 20; 44(6):725-31. Yang WY, Novembre J, Eskin E, Halperin E. PMID: 22610118; PMCID: PMC3592563.
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Haplotype reconstruction using perfect phylogeny and sequence data. BMC Bioinformatics. 2012 Apr 19; 13 Suppl 6:S3. Efros A, Halperin E. PMID: 22537042; PMCID: PMC3330028.
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MGMR: leveraging RNA-Seq population data to optimize expression estimation. BMC Bioinformatics. 2012 Apr 19; 13 Suppl 6:S2. Rozov R, Halperin E, Shamir R. PMID: 22537041; PMCID: PMC3358656.
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Fast and accurate inference of local ancestry in Latino populations. Bioinformatics. 2012 May 15; 28(10):1359-67. Baran Y, Pasaniuc B, Sankararaman S, Torgerson DG, Gignoux C, Eng C, Rodriguez-Cintron W, Chapela R, Ford JG, Avila PC, Rodriguez-Santana J, Burchard EG, Halperin E. PMID: 22495753; PMCID: PMC3348558.
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Joint analysis of multiple metagenomic samples. PLoS Comput Biol. 2012; 8(2):e1002373. Baran Y, Halperin E. PMID: 22359490; PMCID: PMC3280959.
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Pedigree reconstruction using identity by descent. J Comput Biol. 2011 Nov; 18(11):1481-93. Kirkpatrick B, Li SC, Karp RM, Halperin E. PMID: 22035331.
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Meta-analysis of genome-wide association studies from the CHARGE consortium identifies common variants associated with carotid intima media thickness and plaque. Nat Genet. 2011 Sep 11; 43(10):940-7. Bis JC, Kavousi M, Franceschini N, Isaacs A, Abecasis GR, Schminke U, Post WS, Smith AV, Cupples LA, Markus HS, Schmidt R, Huffman JE, Lehtimäki T, Baumert J, Münzel T, Heckbert SR, Dehghan A, North K, Oostra B, Bevan S, Stoegerer EM, Hayward C, Raitakari O, Meisinger C, Schillert A, Sanna S, Völzke H, Cheng YC, Thorsson B, Fox CS, Rice K, Rivadeneira F, Nambi V, Halperin E, Petrovic KE, Peltonen L, Wichmann HE, Schnabel RB, Dörr M, Parsa A, Aspelund T, Demissie S, Kathiresan S, Reilly MP, Taylor K, Uitterlinden A, Couper DJ, Sitzer M, Kähönen M, Illig T, Wild PS, Orru M, Lüdemann J, Shuldiner AR, Eiriksdottir G, White CC, Rotter JI, Hofman A, Seissler J, Zeller T, Usala G, Ernst F, Launer LJ, D'Agostino RB, O'Leary DH, Ballantyne C, Thiery J, Ziegler A, Lakatta EG, Chilukoti RK, Harris TB, Wolf PA, Psaty BM, Polak JF, Li X, Rathmann W, Uda M, Boerwinkle E, Klopp N, Schmidt H, Wilson JF, Viikari J, Koenig W, Blankenberg S, Newman AB, Witteman J, Heiss G, Duijn Cv, Scuteri A, Homuth G, Mitchell BD, Gudnason V, O'Donnell CJ, CARDIoGRAM Consortium. PMID: 21909108; PMCID: PMC3257519.
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Inhibition of activated pericentromeric SINE/Alu repeat transcription in senescent human adult stem cells reinstates self-renewal. Cell Cycle. 2011 Sep 01; 10(17):3016-30. Wang J, Geesman GJ, Hostikka SL, Atallah M, Blackwell B, Lee E, Cook PJ, Pasaniuc B, Shariat G, Halperin E, Dobke M, Rosenfeld MG, Jordan IK, Lunyak VV. PMID: 21862875; PMCID: PMC3218602.
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Novel associations for coronary artery disease derived from genome wide association studies are not associated with increased carotid intima-media thickness, suggesting they do not act via early atherosclerosis or vessel remodeling. Atherosclerosis. 2011 Dec; 219(2):684-9. Conde L, Bevan S, Sitzer M, Klopp N, Illig T, Thiery J, Seissler J, Baumert J, Raitakari O, Kähönen M, Lyytikäinen LP, Laaksonen R, Viikari J, Lehtimäki T, Koernig W, Halperin E, Markus HS. PMID: 21924425.
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Matrin 3 binds and stabilizes mRNA. PLoS One. 2011; 6(8):e23882. Salton M, Elkon R, Borodina T, Davydov A, Yaspo ML, Halperin E, Shiloh Y. PMID: 21858232; PMCID: PMC3157474.
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Genotyping common and rare variation using overlapping pool sequencing. BMC Bioinformatics. 2011; 12 Suppl 6:S2. He D, Zaitlen N, Pasaniuc B, Eskin E, Halperin E. PMID: 21989232; PMCID: PMC3194190.
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A search for overlapping genetic susceptibility loci between non-Hodgkin lymphoma and autoimmune diseases. Genomics. 2011 Jul; 98(1):9-14. Conde L, Bracci PM, Halperin E, Skibola CF. PMID: 21439368; PMCID: PMC3129413.
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Large-scale association analysis identifies 13 new susceptibility loci for coronary artery disease. Nat Genet. 2011 Mar 06; 43(4):333-8. Schunkert H, König IR, Kathiresan S, Reilly MP, Assimes TL, Holm H, Preuss M, Stewart AF, Barbalic M, Gieger C, Absher D, Aherrahrou Z, Allayee H, Altshuler D, Anand SS, Andersen K, Anderson JL, Ardissino D, Ball SG, Balmforth AJ, Barnes TA, Becker DM, Becker LC, Berger K, Bis JC, Boekholdt SM, Boerwinkle E, Braund PS, Brown MJ, Burnett MS, Buysschaert I, Cardiogenics, Carlquist JF, Chen L, Cichon S, Codd V, Davies RW, Dedoussis G, Dehghan A, Demissie S, Devaney JM, Diemert P, Do R, Doering A, Eifert S, Mokhtari NE, Ellis SG, Elosua R, Engert JC, Epstein SE, de Faire U, Fischer M, Folsom AR, Freyer J, Gigante B, Girelli D, Gretarsdottir S, Gudnason V, Gulcher JR, Halperin E, Hammond N, Hazen SL, Hofman A, Horne BD, Illig T, Iribarren C, Jones GT, Jukema JW, Kaiser MA, Kaplan LM, Kastelein JJ, Khaw KT, Knowles JW, Kolovou G, Kong A, Laaksonen R, Lambrechts D, Leander K, Lettre G, Li M, Lieb W, Loley C, Lotery AJ, Mannucci PM, Maouche S, Martinelli N, McKeown PP, Meisinger C, Meitinger T, Melander O, Merlini PA, Mooser V, Morgan T, Mühleisen TW, Muhlestein JB, Münzel T, Musunuru K, Nahrstaedt J, Nelson CP, Nöthen MM, Olivieri O, Patel RS, Patterson CC, Peters A, Peyvandi F, Qu L, Quyyumi AA, Rader DJ, Rallidis LS, Rice C, Rosendaal FR, Rubin D, Salomaa V, Sampietro ML, Sandhu MS, Schadt E, Schäfer A, Schillert A, Schreiber S, Schrezenmeir J, Schwartz SM, Siscovick DS, Sivananthan M, Sivapalaratnam S, Smith A, Smith TB, Snoep JD, Soranzo N, Spertus JA, Stark K, Stirrups K, Stoll M, Tang WH, Tennstedt S, Thorgeirsson G, Thorleifsson G, Tomaszewski M, Uitterlinden AG, van Rij AM, Voight BF, Wareham NJ, Wells GA, Wichmann HE, Wild PS, Willenborg C, Witteman JC, Wright BJ, Ye S, Zeller T, Ziegler A, Cambien F, Goodall AH, Cupples LA, Quertermous T, März W, Hengstenberg C, Blankenberg S, Ouwehand WH, Hall AS, Deloukas P, Thompson JR, Stefansson K, Roberts R, Thorsteinsdottir U, O'Donnell CJ, McPherson R, Erdmann J, CARDIoGRAM Consortium, Samani NJ. PMID: 21378990; PMCID: PMC3119261.
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Accurate estimation of expression levels of homologous genes in RNA-seq experiments. J Comput Biol. 2011 Mar; 18(3):459-68. Pasaniuc B, Zaitlen N, Halperin E. PMID: 21385047.
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Presymptomatic risk assessment for chronic non-communicable diseases. PLoS One. 2010 Dec 31; 5(12):e14338. Padhukasahasram B, Halperin E, Wessel J, Thomas DJ, Silver E, Trumbower H, Cargill M, Stephan DA. PMID: 21217814; PMCID: PMC3013091.
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A generic coalescent-based framework for the selection of a reference panel for imputation. Genet Epidemiol. 2010 Dec; 34(8):773-82. Pasaniuc B, Avinery R, Gur T, Skibola CF, Bracci PM, Halperin E. PMID: 21058333; PMCID: PMC3876740.
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Design of the Coronary ARtery DIsease Genome-Wide Replication And Meta-Analysis (CARDIoGRAM) Study: A Genome-wide association meta-analysis involving more than 22 000 cases and 60 000 controls. Circ Cardiovasc Genet. 2010 Oct; 3(5):475-83. Preuss M, König IR, Thompson JR, Erdmann J, Absher D, Assimes TL, Blankenberg S, Boerwinkle E, Chen L, Cupples LA, Hall AS, Halperin E, Hengstenberg C, Holm H, Laaksonen R, Li M, März W, McPherson R, Musunuru K, Nelson CP, Burnett MS, Epstein SE, O'Donnell CJ, Quertermous T, Rader DJ, Roberts R, Schillert A, Stefansson K, Stewart AF, Thorleifsson G, Voight BF, Wells GA, Ziegler A, Kathiresan S, Reilly MP, Samani NJ, Schunkert H, CARDIoGRAM Consortium. PMID: 20923989; PMCID: PMC3070269.
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miRNAkey: a software for microRNA deep sequencing analysis. Bioinformatics. 2010 Oct 15; 26(20):2615-6. Ronen R, Gan I, Modai S, Sukacheov A, Dror G, Halperin E, Shomron N. PMID: 20801911.
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Genome-wide association study of follicular lymphoma identifies a risk locus at 6p21.32. Nat Genet. 2010 Aug; 42(8):661-4. Conde L, Halperin E, Akers NK, Brown KM, Smedby KE, Rothman N, Nieters A, Slager SL, Brooks-Wilson A, Agana L, Riby J, Liu J, Adami HO, Darabi H, Hjalgrim H, Low HQ, Humphreys K, Melbye M, Chang ET, Glimelius B, Cozen W, Davis S, Hartge P, Morton LM, Schenk M, Wang SS, Armstrong B, Kricker A, Milliken S, Purdue MP, Vajdic CM, Boyle P, Lan Q, Zahm SH, Zhang Y, Zheng T, Becker N, Benavente Y, Boffetta P, Brennan P, Butterbach K, Cocco P, Foretova L, Maynadié M, de Sanjosé S, Staines A, Spinelli JJ, Achenbach SJ, Call TG, Camp NJ, Glenn M, Caporaso NE, Cerhan JR, Cunningham JM, Goldin LR, Hanson CA, Kay NE, Lanasa MC, Leis JF, Marti GE, Rabe KG, Rassenti LZ, Spector LG, Strom SS, Vachon CM, Weinberg JB, Holly EA, Chanock S, Smith MT, Bracci PM, Skibola CF. PMID: 20639881; PMCID: PMC2913472.
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Haplotype inference in complex pedigrees. J Comput Biol. 2010 Mar; 17(3):269-80. Kirkpatrick B, Halperin E, Karp RM. PMID: 20377445.
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Chemokine polymorphisms and lymphoma: a pooled analysis. Leuk Lymphoma. 2010 Mar; 51(3):497-506. Bracci PM, Skibola CF, Conde L, Halperin E, Lightfoot T, Smith A, Paynter RA, Skibola DR, Agana L, Roman E, Kane E, Wiencke JK. PMID: 20038229; PMCID: PMC3443685.
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Leveraging genetic variability across populations for the identification of causal variants. Am J Hum Genet. 2010 Jan; 86(1):23-33. Zaitlen N, Pasaniuc B, Gur T, Ziv E, Halperin E. PMID: 20085711; PMCID: PMC2801753.
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Detection of molecular paths associated with insulitis and type 1 diabetes in non-obese diabetic mouse. PLoS One. 2009 Oct 02; 4(10):e7323. Lindfors E, Gopalacharyulu PV, Halperin E, Oresic M. PMID: 19798418; PMCID: PMC2749452.
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Genomic privacy and limits of individual detection in a pool. Nat Genet. 2009 Sep; 41(9):965-7. Sankararaman S, Obozinski G, Jordan MI, Halperin E. PMID: 19701190.
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Genetic variants at 6p21.33 are associated with susceptibility to follicular lymphoma. Nat Genet. 2009 Aug; 41(8):873-5. Skibola CF, Bracci PM, Halperin E, Conde L, Craig DW, Agana L, Iyadurai K, Becker N, Brooks-Wilson A, Curry JD, Spinelli JJ, Holly EA, Riby J, Zhang L, Nieters A, Smith MT, Brown KM. PMID: 19620980; PMCID: PMC2823809.
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Inference of locus-specific ancestry in closely related populations. Bioinformatics. 2009 Jun 15; 25(12):i213-21. Pasaniuc B, Sankararaman S, Kimmel G, Halperin E. PMID: 19477991; PMCID: PMC2687951.
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SNP imputation in association studies. Nat Biotechnol. 2009 Apr; 27(4):349-51. Halperin E, Stephan DA. PMID: 19352374.
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Maximizing power in association studies. Nat Biotechnol. 2009 Mar; 27(3):255-6. Halperin E, Stephan DA. PMID: 19270676.
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Association mapping and significance estimation via the coalescent. Am J Hum Genet. 2008 Dec; 83(6):675-83. Kimmel G, Karp RM, Jordan MI, Halperin E. PMID: 19026399; PMCID: PMC2668060.
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Polymorphisms in the estrogen receptor 1 and vitamin C and matrix metalloproteinase gene families are associated with susceptibility to lymphoma. PLoS One. 2008 Jun 30; 3(7):e2816. Skibola CF, Bracci PM, Halperin E, Nieters A, Hubbard A, Paynter RA, Skibola DR, Agana L, Becker N, Tressler P, Forrest MS, Sankararaman S, Conde L, Holly EA, Smith MT. PMID: 18636124; PMCID: PMC2474696.
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On the inference of ancestries in admixed populations. Genome Res. 2008 Apr; 18(4):668-75. Sankararaman S, Kimmel G, Halperin E, Jordan MI. PMID: 18353809; PMCID: PMC2279254.
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Estimating local ancestry in admixed populations. Am J Hum Genet. 2008 Feb; 82(2):290-303. Sankararaman S, Sridhar S, Kimmel G, Halperin E. PMID: 18252211; PMCID: PMC2664993.
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Algorithms for efficient near-perfect phylogenetic tree reconstruction in theory and practice. IEEE/ACM Trans Comput Biol Bioinform. 2007 Oct-Dec; 4(4):561-71. Sridhar S, Dhamdhere K, Blelloch G, Halperin E, Ravi R, Schwartz R. PMID: 17975268.
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HAPLOPOOL: improving haplotype frequency estimation through DNA pools and phylogenetic modeling. Bioinformatics. 2007 Nov 15; 23(22):3048-55. Kirkpatrick B, Armendariz CS, Karp RM, Halperin E. PMID: 17895275.
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A randomization test for controlling population stratification in whole-genome association studies. Am J Hum Genet. 2007 Nov; 81(5):895-905. Kimmel G, Jordan MI, Halperin E, Shamir R, Karp RM. PMID: 17924333; PMCID: PMC2265648.
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Leveraging the HapMap correlation structure in association studies. Am J Hum Genet. 2007 Apr; 80(4):683-91. Zaitlen N, Kang HM, Eskin E, Halperin E. PMID: 17357074; PMCID: PMC1852710.
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Using DNA pools for genotyping trios. Nucleic Acids Res. 2006; 34(19):e129. Beckman KB, Abel KJ, Braun A, Halperin E. PMID: 17020923; PMCID: PMC1636483.
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A note on phasing long genomic regions using local haplotype predictions. J Bioinform Comput Biol. 2006 Jun; 4(3):639-47. Eskin E, Sharan R, Halperin E. PMID: 16960967.
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HAPLOFREQ--estimating haplotype frequencies efficiently. J Comput Biol. 2006 Mar; 13(2):481-500. Halperin E, Hazan E. PMID: 16597253.
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A comparison of phasing algorithms for trios and unrelated individuals. Am J Hum Genet. 2006 Mar; 78(3):437-50. Marchini J, Cutler D, Patterson N, Stephens M, Eskin E, Halperin E, Lin S, Qin ZS, Munro HM, Abecasis GR, Donnelly P, International HapMap Consortium. PMID: 16465620; PMCID: PMC1380287.
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Inference and analysis of haplotypes from combined genotyping studies deposited in dbSNP. Genome Res. 2005 Nov; 15(11):1594-600. Zaitlen NA, Kang HM, Feolo ML, Sherry ST, Halperin E, Eskin E. PMID: 16251470; PMCID: PMC1310648.
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Tag SNP selection in genotype data for maximizing SNP prediction accuracy. Bioinformatics. 2005 Jun; 21 Suppl 1:i195-203. Halperin E, Kimmel G, Shamir R. PMID: 15961458.
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Haplotype reconstruction from genotype data using Imperfect Phylogeny. Bioinformatics. 2004 Aug 12; 20(12):1842-9. Halperin E, Eskin E. PMID: 14988101.
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Efficient reconstruction of haplotype structure via perfect phylogeny. J Bioinform Comput Biol. 2003 Apr; 1(1):1-20. Eskin E, Halperin E, Karp RM. PMID: 15290779.
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Handling long targets and errors in sequencing by hybridization. J Comput Biol. 2003; 10(3-4):483-97. Halperin E, Halperin S, Hartman T, Shamir R. PMID: 12935339.
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Should academic medical centers conduct clinical trials of the efficacy of intercessory prayer? Acad Med. 2001 Aug; 76(8):791-7. Halperin EC. PMID: 11500278.
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Non-human to human organ transplantation: its biologic basis and a potential role for radiation therapy. Int J Cancer. 2001 Apr 20; 96(2):76-89. Halperin EC. PMID: 11291089.
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Duration of symptoms prior to diagnosis is related inversely to presenting disease stage in children with medulloblastoma. Cancer. 2001 Apr 15; 91(8):1444-50. Halperin EC, Watson DM, George SL. PMID: 11301391.
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The influence of hyperbaric oxygen therapy and irradiation on hydroxyapatite ocular implant exposure and fibrovascular ingrowth in New Zealand white rabbits. Ophthalmic Plast Reconstr Surg. 1999 Nov; 15(6):412-9. DeBacker CM, Dutton JJ, Proia AD, Halperin EC, Wagle TN, Holck DE. PMID: 10588250.
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Publish or perish--and bankrupt the medical library while we're at it. Acad Med. 1999 May; 74(5):470-2. Halperin EC. PMID: 10353275.
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Long-term results of therapy for stage C neuroblastoma. J Surg Oncol. 1996 Nov; 63(3):172-8. Halperin EC. PMID: 8944061.
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Is there a correlation between duration of presenting symptoms and stage of medulloblastoma at the time of diagnosis? Cancer. 1996 Aug 15; 78(4):874-80. Halperin EC, Friedman HS. PMID: 8756384.
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Resolution of Budd-Chiari syndrome following bone marrow transplantation for paroxysmal nocturnal haemoglobinuria. Br J Haematol. 1996 Mar; 92(3):707-10. Graham ML, Rosse WF, Halperin EC, Miller CR, Ware RE. PMID: 8616041.
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Fabrication and testing of a device capable of reducing the incidence of ventricular shunt promoted metastasis. J Neurooncol. 1996 Jan; 27(1):39-46. Halperin EC, Samulski T, Oakes WJ, Friedman HS. PMID: 8699224.
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What medical schools and universities can learn from one another. Acad Med. 1995 Oct; 70(10):879-83. Halperin EC, Byyny RL, Moore S, Morahan PS. PMID: 7575918.
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Malignant gliomas in older adults with poor prognostic signs. Getting nowhere, and taking a long time to do it. Oncology (Williston Park). 1995 Mar; 9(3):229-34; discussion 237-8, 243. Halperin EC. PMID: 7669516.
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Management of pineal non-germinoma germ cell tumor with residual teratoma and normal alpha-fetoprotein. Med Pediatr Oncol. 1994; 22(2):137-9. Nashold JR, Oakes WJ, Friedman HS, Halperin EC, Soo M, Hockenberger B, Fuller GN, Tien R. PMID: 7505047.
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Arteriovenous malformation mimicking recurrent medulloblastoma. Med Pediatr Oncol. 1994; 22(2):140-3. Moghrabi A, Friedman HS, McLendon R, Hockenberger B, Tien RD, Halperin EC, Oakes WJ. PMID: 8259101.
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Surgery, hyperfractionated craniospinal irradiation, and adjuvant chemotherapy in the management of supratentorial embryonal neuroepithelial neoplasms in children. Surg Neurol. 1993 Oct; 40(4):278-83. Halperin EC, Friedman HS, Schold SC, Fuchs HE, Oakes WJ, Hockenberger B, Burger PC. PMID: 8211637.
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Multiple fraction-per-day radiotherapy for patients with brain stem tumors. J Neurooncol. 1993 Aug; 17(2):131-8. Hebert ME, Halperin EC, Oakes WJ, Boyko OB. PMID: 8145056.
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Comparison of serial PET and MRI scans in a pediatric patient with a brainstem glioma. Med Pediatr Oncol. 1993; 21(4):301-6. Bruggers CS, Friedman HS, Fuller GN, Tien RD, Marks LB, Halperin EC, Hockenberger B, Oakes WJ, Hoffman JM. PMID: 8469227.
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Multiple authorship in two English-language journals in radiation oncology. Acad Med. 1992 Dec; 67(12):850-6. Halperin EC, Scott J, George SL. PMID: 1457022.
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Back pain and paraplegia in a fifteen-year-old boy. J Pediatr. 1992 Oct; 121(4):652-8. Malik RK, Fuller GN, Oakes WJ, Tien R, Hockenberger B, Friedman HS, Halperin EC. PMID: 1403406.
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Successful therapy for trilateral retinoblastoma. Am J Ophthalmol. 1992 Jul 15; 114(1):23-9. Nelson SC, Friedman HS, Oakes WJ, Halperin EC, Tien R, Fuller GN, Hockenberger B, Scroggs MW, Moncino M, Kurtzberg J, et al. PMID: 1621782.
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Endobronchial interstitial Au-198 implantation in the treatment of recurrent bronchogenic carcinoma. J Surg Oncol. 1992 Apr; 49(4):213-9. Tomberlin JK, Halperin EC, Kusin P, Leopold K, Bentel G, George S, Powers M, Wolfe W. PMID: 1556864.
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Syndrome of inappropriate secretion of antidiuretic hormone in a patient with carcinoma of the nasopharynx. Cancer. 1992 Mar 15; 69(6):1315-9. Kavanagh BD, Halperin EC, Rosenbaum LC, Shannon EM, Nilaver G. PMID: 1540868.
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A groundless hypothesis, megaloblastic madness, and the founding of Duke University. Med Hypotheses. 1991 Nov; 36(3):200-3. Halperin EC. PMID: 1787810.
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Total lymphoid irradiation for cardiac xenotransplantation in nonhuman primates. Transplant Proc. 1991 Feb; 23(1 Pt 1):587-8. Bollinger RR, Fabian MA, Harland RC, Murray WJ, Baldwin WM, Abernethy K, Britt L, Sontag M, Halperin EC. PMID: 1824993.
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The effect of 15-deoxyspergualin on hamster-to-rat cardiac xenograft survival. Transplant Proc. 1991 Feb; 23(1 Pt 1):585-6. Pruitt SK, Halperin EC, Bollinger RR. PMID: 1990618.
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High-dose areas are unintentionally created as a result of gap shifts when the prescribed dose in the two adjacent areas are different. Med Dosim. 1990 Dec; 15(4):179-83. Bentel GC, Halperin EC. PMID: 2073330.
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Effects of hyperthermia and irradiation on the growth of mouse melanoma tumors following immunotherapy. J Surg Oncol. 1990 Aug; 44(4):256-9. Green DM, Samulski TV, Vervaert C, Halperin EC, Oleson JR, Seigler H. PMID: 2385103.
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L-buthionine-sulfoximine-mediated radiosensitization in experimental interstitial radiotherapy of intracerebral D-54 MG glioma xenografts in athymic mice. Neurosurgery. 1990 Feb; 26(2):255-60. Lippitz BE, Halperin EC, Griffith OW, Colvin OM, Honore G, Ostertag CB, Bigner DD, Friedman HS. PMID: 2308673.
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Radiation therapy treatment planning in supratentorial glioblastoma multiforme: an analysis based on post mortem topographic anatomy with CT correlations. Int J Radiat Oncol Biol Phys. 1989 Dec; 17(6):1347-50. Halperin EC, Bentel G, Heinz ER, Burger PC. PMID: 2557310.
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The effects of total lymphoid irradiation upon corneal vascularization in the rat following chemical cautery. Radiat Res. 1989 Feb; 117(2):259-72. Suvarnamani C, Halperin EC, Proia AD, Klintworth GK. PMID: 2466304.
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Selection of a management strategy for pediatric brainstem tumors. Med Pediatr Oncol. 1989; 17(2):117-26. Halperin EC, Wehn SM, Scott JW, Djang W, Oakes WJ, Friedman HS. PMID: 2704333.
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X-rays at the bar, 1896-1910. Invest Radiol. 1988 Aug; 23(8):639-46. Halperin EC. PMID: 3047081.
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Phenotypic and genotypic analysis of a human medulloblastoma cell line and transplantable xenograft (D341 Med) demonstrating amplification of c-myc. Am J Pathol. 1988 Mar; 130(3):472-84. Friedman HS, Burger PC, Bigner SH, Trojanowski JQ, Brodeur GM, He XM, Wikstrand CJ, Kurtzberg J, Berens ME, Halperin EC, et al. PMID: 3279793; PMCID: PMC1880676.
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Oligodendroglioma. An analysis of the value of radiation therapy. Cancer. 1987 Nov 01; 60(9):2179-88. Bullard DE, Rawlings CE, Phillips B, Cox EB, Schold SC, Burger P, Halperin EC. PMID: 3440228.
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